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ensembl release
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reset
5
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9
replies
3.5k
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Correct version of EnsDb.Hsapiens for ensembl transcriptome
ensembldb
ensembl release
rnaseq
salmon
tximport
6.3 years ago
emmak
▴ 20
0
votes
2
replies
1.4k
views
Txtimport for kallisto on hg38 v87
txtimport
deseq2
ensembl release
updated 7.1 years ago by
James W. MacDonald
65k • written 7.1 years ago by
jarod_v6@libero.it
▴ 40
1
vote
1
reply
1.2k
views
News:
Ensembl release 86 is out!
ensembl
biomart
ensembl release
ensembl mart
News
7.6 years ago
Thomas Maurel
▴ 800
1
vote
0
replies
1.1k
views
News:
Ensembl release 85 is out!
ensembl
biomart
release85
ensembl release
mart
News
7.8 years ago
Thomas Maurel
▴ 800
4
votes
9
replies
3.0k
views
News:
Ensembl release 84 is out!
ensembl
mart
release84
biomart
ensembl release
News
updated 8.1 years ago by
arielpaulson
▴ 20 • written 8.2 years ago by
Thomas Maurel
▴ 800
0
votes
0
replies
1.6k
views
News:
Ensembl 83 is out!
ensemble mart
ensembl
biomart
ensembl release
News
8.4 years ago
amonida
▴ 20
6 results • Page
1 of 1
Recent ...
Replies
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★ 3.3k
From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …
Comment: deseq2 results
by
ATpoint
★ 4.1k
> the results are not satisfactory to me Well, what is your question? The DESeq2 vignette covers how to do analysis, and some diagnostics…
Comment: Extremely small p-values using Limma for proteomic data
by
ATpoint
★ 4.1k
It's not an implementation problem I am discussing (it's trivial obviously) -- more that for most purposes the y-axis metric should be the …
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★ 3.3k
For visualization purposes you can draw an horizontal line at the p-value cutoff that meets the experiment-wide FDR cutoff. For instance, i…
Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Ask yourself the question how a gene that is exactly the same everywhere adds anything to any analysis. Heatmaps usually take DEGs to infer…
Votes
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
Answer: Cannot connect to ExperimentHub server
Answer: confused with tximport counts abundance using salmon input
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
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